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  5. Vocar.0015s0195.1

Vocar.0015s0195.1 (32898856)


Aliases : 32898856

Description : Squalene/phytoene synthase [Interproscan].


Gene families : OG_01_0000364 (OrthoFinder) Phylogenetic Tree(s): OG0000364_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0015s0195.1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001107.11 tig00001107_g7096.t1 Secondary metabolism.terpenoids.terpenoid... 0.02 OrthoFinder
Cre03.g175250 30787436 Secondary metabolism.terpenoids.terpenoid... 0.02 OrthoFinder
Cre11.g467544 30775491, IDI1 Secondary metabolism.terpenoids.mevalonate... 0.02 OrthoFinder
EOD03919 No alias Aldose 1-/Glucose-6-phosphate 1-epimerase [Interproscan]. 0.02 OrthoFinder
EOD06614 No alias NUDIX hydrolase domain [Interproscan]. 0.01 OrthoFinder
Vocar.0014s0248.1 32888525 NUDIX hydrolase domain [Interproscan]. 0.04 OrthoFinder
XM_002501410.1 MICPUN_108133, 108133 Squalene/phytoene synthase [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57248.1_9405 PRW57248 Galactose mutarotase 0.02 OrthoFinder
lcl|LHPG02000016.1_cds_PRW33535.1_3279 PRW33535 Isopentenyl-diphosphate delta-isomerase I 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495327.1_1325 KAA8495327 Squalene synthase 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004814 arginine-tRNA ligase activity IEP Enrichment
MF GO:0004827 proline-tRNA ligase activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006420 arginyl-tRNA aminoacylation IEP Enrichment
BP GO:0006433 prolyl-tRNA aminoacylation IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0035251 UDP-glucosyltransferase activity IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
MF GO:0046527 glucosyltransferase activity IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment

No InterPro domains available for this sequence

No external refs found!