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  5. Vocar.0015s0181.1

Vocar.0015s0181.1 (32899218)


Aliases : 32899218

Description : GTP-binding protein LepA, C-terminal; Transcription factor, GTP-binding domain; Elongation factor EFG, domain V-like [Interproscan].


Gene families : OG_01_0000765 (OrthoFinder) Phylogenetic Tree(s): OG0000765_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0015s0181.1
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_55968 55968 Transcription factor, GTP-binding domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01001866.1_cds_GFH21621.1_16098 HaLaN_18964, GFH21621 Ribosomal back-translocase 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006366 transcription by RNA polymerase II IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
InterPro domains Description Start Stop
IPR000640 EFG_V-like 832 919
IPR013842 LepA_CTD 924 1027
IPR000795 T_Tr_GTP-bd_dom 411 588
No external refs found!