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  5. Vocar.0015s0086.1

Vocar.0015s0086.1 (32898998)


Aliases : 32898998

Description : Ribosomal protein L44e [Interproscan].


Gene families : OG_01_0005313 (OrthoFinder) Phylogenetic Tree(s): OG0005313_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0015s0086.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000489.11 tig00000489_g1370.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.15 OrthoFinder
Cre06.g310700 30778817, RPL36a Protein biosynthesis.cytosolic ribosome.large subunit... 0.21 OrthoFinder
Dusal.0071s00021.1 33185702 Ribosomal protein L44e [Interproscan]. 0.12 OrthoFinder
OT_17G00870.1 No alias Ribosomal protein L44e [Interproscan]. 0.11 OrthoFinder
PTI_05G04360.1 No alias Ribosomal protein L44e [Interproscan]. 0.15 OrthoFinder
Sro232_g093840.1 Contig4063.g31149 60S ribosomal protein L44 0.25 OrthoFinder
TP05G02970.1 No alias Ribosomal protein L44e [Interproscan]. 0.23 OrthoFinder
XM_002508801.1 MICPUN_62094, 62094 Ribosomal protein L44 0.2 OrthoFinder
XM_003063940.1 MicpuC2_30148, 30148 Ribosomal protein L44e [Interproscan]. 0.07 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57355.1_8982 PRW57355 60S ribosomal L44 0.16 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496828.1_557 KAA8496828 60S ribosomal protein L44 Q 0.14 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
CC GO:0000814 ESCRT II complex IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006487 protein N-linked glycosylation IEP Enrichment
BP GO:0007021 tubulin complex assembly IEP Enrichment
BP GO:0007023 post-chaperonin tubulin folding pathway IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
CC GO:0008250 oligosaccharyltransferase complex IEP Enrichment
MF GO:0008417 fucosyltransferase activity IEP Enrichment
BP GO:0016125 sterol metabolic process IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
CC GO:0036452 ESCRT complex IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
MF GO:0047750 cholestenol delta-isomerase activity IEP Enrichment
MF GO:0048487 beta-tubulin binding IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
BP GO:0071985 multivesicular body sorting pathway IEP Enrichment
InterPro domains Description Start Stop
IPR000552 Ribosomal_L44e 17 91
No external refs found!