1. Home
  2. Species
  3. Volvox carteri
  4. Sequence
  5. Vocar.0014s0250.1

Vocar.0014s0250.1 (32888569)


Aliases : 32888569

Description : Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain; Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain [Interproscan].


Gene families : OG_01_0001810 (OrthoFinder) Phylogenetic Tree(s): OG0001810_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0014s0250.1
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000378.15 tig00000378_g24507.t1 Glutamate--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana 0.03 OrthoFinder
Cpa|evm.model.tig00000378.16 tig00000378_g24507.t1 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 OrthoFinder
Cz16g14040.t1 No alias Glutamyl/glutaminyl-tRNA synthetase, class Ib,... 0.04 OrthoFinder
Transcript_contig_56634 56634 Glutamyl/glutaminyl-tRNA synthetase, class Ib,... 0.02 OrthoFinder
lcl|BLLF01000570.1_cds_GFH13059.1_7536 HaLaN_08864, GFH13059 Gln-glu non-discriminatory tRNA synthetase 0.01 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45405.1_1446 PRW45405 Glutamyl-tRNA synthetase isoform A 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8497997.1_6950 KAA8497997 Bifunctional glutamate/proline--tRNA ligase 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
BP GO:0043039 tRNA aminoacylation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004618 phosphoglycerate kinase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
BP GO:0006772 thiamine metabolic process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
BP GO:0009228 thiamine biosynthetic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
BP GO:0030488 tRNA methylation IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
CC GO:0034708 methyltransferase complex IEP Enrichment
BP GO:0042723 thiamine-containing compound metabolic process IEP Enrichment
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
CC GO:0043527 tRNA methyltransferase complex IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
InterPro domains Description Start Stop
IPR020058 Glu/Gln-tRNA-synth_Ib_cat-dom 231 540
IPR020059 Glu/Gln-tRNA-synth_Ib_codon-bd 543 723
No external refs found!