Vocar.0014s0207.1 (32888456)

Aliases : 32888456

Description : Zinc finger, RING-CH-type [Interproscan].

Gene families : OG_01_0000217 (OrthoFinder) Phylogenetic Tree(s): OG0000217_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Vocar.0014s0207.1
Cluster	HCCA: Cluster_92

Target	Alias	Description	ECC score	Gene Family Method
Cz08g00320.t1	No alias	Zinc finger, RING-CH-type [Interproscan].	0.02	OrthoFinder
Sro882_g215330.1	Contig1771.g15676	Zinc finger, RING-CH-type; Protein of unknown function...	0.02	OrthoFinder
lcl\|LHPG02000016.1_cds_PRW33644.1_3169	PRW33644	E3 ubiquitin-ligase MARCH3-like	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Enrichment
BP	GO:0006897	endocytosis	IEP	Enrichment
BP	GO:0016192	vesicle-mediated transport	IEP	Enrichment
BP	GO:0016567	protein ubiquitination	IEP	Enrichment
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Enrichment
BP	GO:0032446	protein modification by small protein conjugation	IEP	Enrichment
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR011016	Znf_RING-CH	119	164

External Links

No external refs found!