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  5. Cpa|evm.model.tig00000246.1

Cpa|evm.model.tig00000246.1 (tig00000246_g21494.t1)


Aliases : tig00000246_g21494.t1

Description : Transcription factor MYB3R-3 OS=Arabidopsis thaliana


Gene families : OG_01_0000018 (OrthoFinder) Phylogenetic Tree(s): OG0000018_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000246.1
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
EOD17696 No alias Myb-like DNA-binding domain [Interproscan]. 0.02 OrthoFinder
TP22G01540.1 No alias Myb-like DNA-binding domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_78900 78900 SANT/Myb domain [Interproscan]. 0.01 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8496233.1_2231 KAA8496233 Transcription factor MYB3R-5 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP Enrichment
MF GO:0004659 prenyltransferase activity IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006487 protein N-linked glycosylation IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
MF GO:0008318 protein prenyltransferase activity IEP Enrichment
MF GO:0008375 acetylglucosaminyltransferase activity IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Enrichment
InterPro domains Description Start Stop
IPR001005 SANT/Myb 887 931
IPR001005 SANT/Myb 938 983
No external refs found!