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  5. Vocar.0013s0148.1

Vocar.0013s0148.1 (32896393)


Aliases : 32896393

Description : DNA polymerase I-like, H3TH domain; 5'-3' exonuclease, alpha-helical arch, N-terminal [Interproscan].


Gene families : OG_01_0000954 (OrthoFinder) Phylogenetic Tree(s): OG0000954_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0013s0148.1
Cluster HCCA: Cluster_22


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
InterPro domains Description Start Stop
IPR020045 DNA_polI_H3TH 611 683
IPR020046 5-3_exonucl_a-hlix_arch_N 472 574
IPR020046 5-3_exonucl_a-hlix_arch_N 267 332
No external refs found!