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  5. Vocar.0013s0133.1

Vocar.0013s0133.1 (32896503)


Aliases : 32896503

Description : Sperm-tail PG-rich repeat [Interproscan].


Gene families : OG_01_0006898 (OrthoFinder) Phylogenetic Tree(s): OG0006898_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0013s0133.1
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
lcl|BLLF01000791.1_cds_GFH14991.1_9468 HaLaN_11137, GFH14991 Sperm-tail PG-rich repeat [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
InterPro domains Description Start Stop
IPR010736 SHIPPO-rpt 421 446
IPR010736 SHIPPO-rpt 307 335
IPR010736 SHIPPO-rpt 387 414
IPR010736 SHIPPO-rpt 351 375
IPR010736 SHIPPO-rpt 627 659
IPR010736 SHIPPO-rpt 771 795
IPR010736 SHIPPO-rpt 837 862
IPR010736 SHIPPO-rpt 589 621
IPR010736 SHIPPO-rpt 666 690
No external refs found!