1. Home
  2. Species
  3. Volvox carteri
  4. Sequence
  5. Vocar.0013s0017.1

Vocar.0013s0017.1 (32896445)


Aliases : 32896445

Description : WD40 repeat; HELP; Anaphase-promoting complex subunit 4, WD40 domain [Interproscan].


Gene families : OG_01_0000109 (OrthoFinder) Phylogenetic Tree(s): OG0000109_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0013s0017.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000042.33 tig00000042_g15425.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00000042.34 tig00000042_g15425.t1 Calpain-type cysteine protease DEK1 OS=Zea mays 0.05 OrthoFinder
Cpa|evm.model.tig00000178.39 tig00000178_g12750.t1 Cilia- and flagella-associated protein 44... 0.02 OrthoFinder
Cpa|evm.model.tig00000204.62 tig00000204_g17729.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00001024.12 tig00001024_g6321.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00020941.35 tig00020941_g16228.t1 No description available 0.02 OrthoFinder
Cre06.g303400 30779939, FAP16 No description available 0.05 OrthoFinder
Cz01g41160.t1 No alias WD40 repeat; HELP [Interproscan]. 0.03 OrthoFinder
Cz05g14030.t1 No alias HELP; Anaphase-promoting complex subunit 4, WD40 domain;... 0.06 OrthoFinder
Cz11g19130.t1 No alias WD40 repeat; Anaphase-promoting complex subunit 4, WD40... 0.02 OrthoFinder
Dusal.0177s00014.1 33189755 WD40 repeat; PLAT/LH2 domain [Interproscan]. 0.02 OrthoFinder
EOD39577 No alias HELP [Interproscan]. 0.06 OrthoFinder
XM_002499921.1 MICPUN_99060, 99060 HELP; WD40 repeat [Interproscan]. 0.02 OrthoFinder
XM_002502455.1 MICPUN_58565, 58565 HELP; PLAT/LH2 domain; WD40 repeat [Interproscan]. 0.02 OrthoFinder
XM_002504527.1 MICPUN_61281, 61281 HELP; WD40 repeat [Interproscan]. 0.03 OrthoFinder
XM_002508893.1 MICPUN_52616, 52616 Hypothetical protein 0.06 OrthoFinder
XM_003055148.1 MicpuC2_6804, 6804 WD40 repeat [Interproscan]. 0.02 OrthoFinder
XM_003058024.1 MicpuC2_57171, 57171 PLAT/LH2 domain; Pleckstrin homology domain [Interproscan]. 0.03 OrthoFinder
XM_003061774.1 MicpuC2_20524, 20524 Hypothetical protein 0.02 OrthoFinder
XM_003063748.1 MicpuC2_42955, 42955 HELP; WD40 repeat [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000536.1_cds_GFH12747.1_7224 HaLaN_08491, GFH12747 PLAT/LH2 domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000936.1_cds_GFH16043.1_10520 HaLaN_12389, GFH16043 Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
CC GO:0005874 microtubule IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006473 protein acetylation IEP Enrichment
BP GO:0006475 internal protein amino acid acetylation IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0018393 internal peptidyl-lysine acetylation IEP Enrichment
BP GO:0018394 peptidyl-lysine acetylation IEP Enrichment
MF GO:0019799 tubulin N-acetyltransferase activity IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
MF GO:0034212 peptide N-acetyltransferase activity IEP Enrichment
BP GO:0043543 protein acylation IEP Enrichment
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Enrichment
BP GO:0071929 alpha-tubulin acetylation IEP Enrichment
CC GO:0099080 supramolecular complex IEP Enrichment
CC GO:0099081 supramolecular polymer IEP Enrichment
CC GO:0099512 supramolecular fiber IEP Enrichment
CC GO:0099513 polymeric cytoskeletal fiber IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 906 942
IPR001680 WD40_repeat 585 609
IPR024977 Apc4_WD40_dom 753 814
IPR005108 HELP 305 366
No external refs found!