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  5. Vocar.0012s0233.1

Vocar.0012s0233.1 (32894971)


Aliases : 32894971

Description : SET domain [Interproscan].


Gene families : OG_01_0000019 (OrthoFinder) Phylogenetic Tree(s): OG0000019_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0012s0233.1
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000737.18 tig00000737_g3797.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00020965.56 tig00020965_g16868.t1 Histone-lysine N-methyltransferase ASHR1 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cre01.g041100 30788888 Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder
Cre15.g639056 30783645 No description available 0.03 OrthoFinder
Cz03g04150.t1 No alias SET domain [Interproscan]. 0.03 OrthoFinder
Cz03g37010.t1 No alias SET domain [Interproscan]. 0.03 OrthoFinder
Cz04g25210.t1 No alias Hypothetical protein 0.03 OrthoFinder
Cz18g08070.t1 No alias SET domain [Interproscan]. 0.05 OrthoFinder
Dusal.0021s00034.1 33197781 SET domain [Interproscan]. 0.01 OrthoFinder
Dusal.0107s00003.1 33192134 SET domain [Interproscan]. 0.01 OrthoFinder
Dusal.0151s00011.1 33191979 Hypothetical protein 0.03 OrthoFinder
Dusal.0293s00006.1 33190178 SET domain [Interproscan]. 0.03 OrthoFinder
Dusal.0771s00003.1 33192570 SET domain [Interproscan]. 0.01 OrthoFinder
EOD22522 No alias SET domain; Zinc finger, MYND-type [Interproscan]. 0.02 OrthoFinder
PTI_31G00290.1 No alias SET domain [Interproscan]. 0.02 OrthoFinder
TP05G03200.1 No alias SET domain [Interproscan]. 0.02 OrthoFinder
XM_002502912.1 MICPUN_59496, 59496 SET domain [Interproscan]. 0.02 OrthoFinder
XM_002506785.1 MICPUN_89128, 89128 Set domain protein 0.05 OrthoFinder
XM_002508014.1 MICPUN_102064, 102064 SET domain [Interproscan]. 0.02 OrthoFinder
XM_003058744.1 MicpuC2_57921, 57921 Set domain protein 0.02 OrthoFinder
XM_003059327.1 MicpuC2_58542, 58542 Set domain protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003856 3-dehydroquinate synthase activity IEP Enrichment
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP Enrichment
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005666 RNA polymerase III complex IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006098 pentose-phosphate shunt IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006383 transcription by RNA polymerase III IEP Enrichment
BP GO:0006739 NADP metabolic process IEP Enrichment
BP GO:0006740 NADPH regeneration IEP Enrichment
BP GO:0007062 sister chromatid cohesion IEP Enrichment
BP GO:0007064 mitotic sister chromatid cohesion IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
CC GO:0030880 RNA polymerase complex IEP Enrichment
CC GO:0031390 Ctf18 RFC-like complex IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
BP GO:0051156 glucose 6-phosphate metabolic process IEP Enrichment
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
InterPro domains Description Start Stop
IPR001214 SET_dom 424 484
No external refs found!