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  5. Vocar.0012s0227.1

Vocar.0012s0227.1 (32894762)


Aliases : 32894762

Description : Small GTPase superfamily, ARF/SAR type [Interproscan].


Gene families : OG_01_0003107 (OrthoFinder) Phylogenetic Tree(s): OG0003107_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0012s0227.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001299.13 tig00001299_g8072.t1 Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 OrthoFinder
Cz13g03010.t1 No alias Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.03 OrthoFinder
PTI_07G01720.1 No alias Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.02 OrthoFinder
XM_002505618.1 MICPUN_63429, 63429 Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000152.1_cds_GFH08306.1_2783 HaLaN_03247, GFH08306 GTP-binding protein SAR2 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
BP GO:0000226 microtubule cytoskeleton organization IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003954 NADH dehydrogenase activity IEP Enrichment
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
CC GO:0005758 mitochondrial intermembrane space IEP Enrichment
CC GO:0005787 signal peptidase complex IEP Enrichment
CC GO:0005815 microtubule organizing center IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006465 signal peptide processing IEP Enrichment
BP GO:0006825 copper ion transport IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
MF GO:0016530 metallochaperone activity IEP Enrichment
MF GO:0016531 copper chaperone activity IEP Enrichment
CC GO:0016592 mediator complex IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
CC GO:0031970 organelle envelope lumen IEP Enrichment
CC GO:0031974 membrane-enclosed lumen IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034453 microtubule anchoring IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
CC GO:0043233 organelle lumen IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
CC GO:0070013 intracellular organelle lumen IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 8 191
No external refs found!