Vocar.0012s0063.1 (32895032)


Aliases : 32895032

Description : PAS domain [Interproscan].


Gene families : OG_01_0000027 (OrthoFinder) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0012s0063.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000317.32 tig00000317_g24044.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00000317.33 tig00000317_g24044.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00001443.3 tig00001443_g8748.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00020902.30 tig00020902_g14981.t1 No description available 0.01 OrthoFinder
Cpa|evm.model.tig00021522.9 tig00021522_g22101.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00021537.33 tig00021537_g22286.t1 No description available 0.02 OrthoFinder
Cre02.g142166 30786493 No description available 0.09 OrthoFinder
Cre05.g233650 30783131, FXL9 No description available 0.04 OrthoFinder
Cre09.g397000 30780571 No description available 0.02 OrthoFinder
Cre10.g427850 30790464 No description available 0.02 OrthoFinder
Cre13.g586700 30784046 No description available 0.02 OrthoFinder
Cre13.g587550 30783866 No description available 0.02 OrthoFinder
Cre17.g698903 30781618 No description available 0.02 OrthoFinder
Cre17.g708000 30782648, FAP260 No description available 0.02 OrthoFinder
Cz03g02250.t1 No alias PAS domain [Interproscan]. 0.03 OrthoFinder
Cz12g28200.t1 No alias PAS domain [Interproscan]. 0.02 OrthoFinder
Cz15g19100.t1 No alias PAS domain [Interproscan]. 0.02 OrthoFinder
Cz18g03020.t1 No alias PAS domain [Interproscan]. 0.04 OrthoFinder
Dusal.0729s00003.1 33203053 PAS domain [Interproscan]. 0.02 OrthoFinder
Dusal.1094s00001.1 33191764 Hypothetical protein 0.02 OrthoFinder
Sro28_g018720.1 Contig404.g5481 Sensor protein FixL 0.01 OrthoFinder
Vocar.0001s0015.1 32886137 PAS fold [Interproscan]. 0.02 OrthoFinder
Vocar.0002s0204.1 32891156 PAS domain; PAS fold [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000513.1_cds_GFH12539.1_7016 HaLaN_08248, GFH12539 PAS domain-containing protein 0.02 OrthoFinder
lcl|BLLF01000958.1_cds_GFH16182.1_10659 HaLaN_12556, GFH16182 PAS domain-containing protein 0.02 OrthoFinder
lcl|BLLF01001584.1_cds_GFH20156.1_14633 HaLaN_17235, GFH20156 PAS domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Enrichment
MF GO:0004620 phospholipase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0009395 phospholipid catabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0016042 lipid catabolic process IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044242 cellular lipid catabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
InterPro domains Description Start Stop
IPR000014 PAS 625 710
IPR000014 PAS 841 881
No external refs found!