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  5. Vocar.0012s0034.1

Vocar.0012s0034.1 (32894923)


Aliases : 32894923

Description : Small GTPase [Interproscan].


Gene families : OG_01_0000215 (OrthoFinder) Phylogenetic Tree(s): OG0000215_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0012s0034.1
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
Dusal.0119s00022.1 33195179 Small GTPase [Interproscan]. 0.01 OrthoFinder
EOD09575 No alias Rab18, rab family GTPase [Ensembl]. 0.02 OrthoFinder
PTI_06G02820.1 No alias Small GTPase [Interproscan]. 0.02 OrthoFinder
XM_003055674.1 MicpuC2_31102, 31102 Small GTPase [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
MF GO:0009916 alternative oxidase activity IEP Enrichment
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Enrichment
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001806 Small_GTPase 15 176
No external refs found!