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  5. Vocar.0011s0304.1

Vocar.0011s0304.1 (32895345)


Aliases : 32895345

Description : Pre-mRNA splicing factor component Cdc5p/Cef1; Myb-like DNA-binding domain [Interproscan].


Gene families : OG_01_0002429 (OrthoFinder) Phylogenetic Tree(s): OG0002429_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0011s0304.1
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Cre03.g197350 30786598 RNA processing.RNA splicing.spliceosome-associated... 0.03 OrthoFinder
EOD25549 No alias Myb-like DNA-binding domain [Interproscan]. 0.03 OrthoFinder
Sro152_g069500.1 Contig69.g710 Cycle 5-like protein 0.02 OrthoFinder
Transcript_contig_57103 57103 Myb-like DNA-binding domain; Pre-mRNA splicing factor... 0.01 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60453.1_4352 PRW60453 Cell division cycle 5 isoform A 0.03 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60454.1_4351 PRW60454 Cell division cycle 5 isoform B 0.03 OrthoFinder
lcl|VRMN01000010.1_cds_KAA8492334.1_5517 KAA8492334 Pre-mRNA-splicing factor CEF1 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003873 6-phosphofructo-2-kinase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
BP GO:0006000 fructose metabolic process IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
MF GO:0008443 phosphofructokinase activity IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
MF GO:0019200 carbohydrate kinase activity IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
MF GO:0035091 phosphatidylinositol binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR021786 Cdc5p/Cef1_C 449 681
No external refs found!