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  5. Vocar.0011s0203.1

Vocar.0011s0203.1 (32895420)


Aliases : 32895420

Description : Pre-mRNA-splicing factor 3; Domain of unknown function DUF1115 [Interproscan].


Gene families : OG_01_0003435 (OrthoFinder) Phylogenetic Tree(s): OG0003435_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0011s0203.1
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Cre09.g416000 30780734 RNA processing.RNA splicing.U2-type-intron-specific... 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0004000 adenosine deaminase activity IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
CC GO:0005892 acetylcholine-gated channel complex IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0019239 deaminase activity IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
CC GO:0034702 ion channel complex IEP Enrichment
CC GO:0035658 Mon1-Ccz1 complex IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
CC GO:0043235 receptor complex IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
CC GO:0090730 Las1 complex IEP Enrichment
CC GO:0098802 plasma membrane signaling receptor complex IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1902555 endoribonuclease complex IEP Enrichment
CC GO:1902911 protein kinase complex IEP Enrichment
CC GO:1905354 exoribonuclease complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR013881 Pre-mRNA_splic_Prp3 286 639
IPR010541 DUF1115 695 833
No external refs found!