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  5. Vocar.0011s0134.1

Vocar.0011s0134.1 (32895267)


Aliases : 32895267

Description : Ribosomal protein S21e [Interproscan].


Gene families : OG_01_0003705 (OrthoFinder) Phylogenetic Tree(s): OG0003705_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0011s0134.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Cre03.g203450 30787782, RPS21 Protein biosynthesis.cytosolic ribosome.small subunit... 0.14 OrthoFinder
Dusal.0001s00040.1 33198798 Ribosomal protein S21e [Interproscan]. 0.07 OrthoFinder
EOD12033 No alias Ribosomal protein S21e [Interproscan]. 0.06 OrthoFinder
OT_16G01860.1 No alias Ribosomal protein S21e [Interproscan]. 0.03 OrthoFinder
PTI_25G00250.1 No alias Ribosomal protein S21e [Interproscan]. 0.09 OrthoFinder
Sro6_g004850.1 Contig175.g1990 40S ribosomal protein S21 0.09 OrthoFinder
SymbC1.scaffold4516.5 4516.5 Ribosomal protein S21e [Interproscan]. 0.01 OrthoFinder
TP04G05880.1 No alias Ribosomal protein S21e [Interproscan]. 0.06 OrthoFinder
XM_002506478.1 MICPUN_109558, 109558 Ribosomal protein S21e [Interproscan]. 0.06 OrthoFinder
XM_003063433.1 MicpuC2_45937, 45937 Ribosomal protein S21e [Interproscan]. 0.04 OrthoFinder
lcl|BLLF01004584.1_cds_GFH29895.1_24372 HaLaN_28641, GFH29895 40S ribosomal protein S21 0.03 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60607.1_4698 PRW60607 40S ribosomal S21-2 0.06 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498324.1_7277 KAA8498324 40S ribosomal protein S21 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
CC GO:0005743 mitochondrial inner membrane IEP Enrichment
CC GO:0005750 mitochondrial respiratory chain complex III IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Enrichment
BP GO:0006487 protein N-linked glycosylation IEP Enrichment
BP GO:0007021 tubulin complex assembly IEP Enrichment
BP GO:0007023 post-chaperonin tubulin folding pathway IEP Enrichment
CC GO:0008250 oligosaccharyltransferase complex IEP Enrichment
BP GO:0009060 aerobic respiration IEP Enrichment
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Enrichment
BP GO:0019646 aerobic electron transport chain IEP Enrichment
CC GO:0019866 organelle inner membrane IEP Enrichment
BP GO:0022900 electron transport chain IEP Enrichment
BP GO:0022904 respiratory electron transport chain IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
CC GO:0034998 oligosaccharyltransferase I complex IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
CC GO:0045275 respiratory chain complex III IEP Enrichment
BP GO:0045333 cellular respiration IEP Enrichment
MF GO:0048487 beta-tubulin binding IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
CC GO:0098798 mitochondrial protein-containing complex IEP Enrichment
CC GO:0098800 inner mitochondrial membrane protein complex IEP Enrichment
CC GO:0098803 respiratory chain complex IEP Enrichment
InterPro domains Description Start Stop
IPR001931 Ribosomal_S21e 1 76
No external refs found!