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  5. Vocar.0011s0121.1

Vocar.0011s0121.1 (32895110)


Aliases : 32895110

Description : tRNA-splicing endonuclease, subunit Sen54, N-terminal [Interproscan].


Gene families : OG_01_0005261 (OrthoFinder) Phylogenetic Tree(s): OG0005261_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0011s0121.1
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
Dusal.0004s00009.1 33201080 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004525 ribonuclease III activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0005200 structural constituent of cytoskeleton IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0010035 response to inorganic substance IEP Enrichment
BP GO:0010038 response to metal ion IEP Enrichment
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Enrichment
MF GO:0033897 ribonuclease T2 activity IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
InterPro domains Description Start Stop
IPR024336 tRNA_splic_suSen54_N 49 102
No external refs found!