Vocar.0009s0332.1 (32893470)

Aliases : 32893470

Description : ClpA/ClpB, AAA lid domain; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal [Interproscan].

Gene families : OG_01_0000068 (OrthoFinder) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Vocar.0009s0332.1
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001416.8 tig00001416_g8954.t1 Chaperone protein ClpC2, chloroplastic OS=Arabidopsis thaliana 0.01 OrthoFinder
Sro20_g014290.1 Contig2954.g23459 Protein ClpB 0.02 OrthoFinder
lcl|BLLF01000672.1_cds_GFH13966.1_8443 HaLaN_09936, GFH13966 ATPase, AAA-type, core [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01001302.1_cds_GFH18442.1_12919 HaLaN_15252, GFH18442 ATPase, AAA-type, core; Clp ATPase, C-terminal [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP Enrichment
BP GO:0006766 vitamin metabolic process IEP Enrichment
BP GO:0006767 water-soluble vitamin metabolic process IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
MF GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity IEP Enrichment
BP GO:0009110 vitamin biosynthetic process IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
InterPro domains Description Start Stop
IPR041546 ClpA/ClpB_AAA_lid 347 447
IPR003959 ATPase_AAA_core 602 783
IPR004176 Clp_R_dom 102 147
IPR004176 Clp_R_dom 22 57
IPR019489 Clp_ATPase_C 789 869
IPR003959 ATPase_AAA_core 207 341
No external refs found!