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  5. Vocar.0009s0275.1

Vocar.0009s0275.1 (32893396)


Aliases : 32893396

Description : RNA recognition motif domain [Interproscan].


Gene families : OG_01_0000048 (OrthoFinder) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0009s0275.1
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Cre13.g586916 30783868 RNA processing.RNA splicing.spliceosome-associated... 0.03 OrthoFinder
Transcript_contig_57014 57014 RNA recognition motif domain; Cleavage stimulation... 0.02 OrthoFinder
Vocar.0007s0376.1 32887918 Cleavage stimulation factor subunit 2, hinge domain; RNA... 0.03 OrthoFinder
lcl|BLLF01000187.1_cds_GFH08821.1_3298 HaLaN_03852, GFH08821 RRM domain-containing protein 0.01 OrthoFinder
lcl|BLLF01004115.1_cds_GFH28947.1_23424 HaLaN_27522, GFH28947 RRM domain-containing protein 0.02 OrthoFinder
lcl|LHPG02000012.1_cds_PRW45151.1_1906 PRW45151 Glycine-rich RNA-binding RZ1C 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
CC GO:0005956 protein kinase CK2 complex IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0019207 kinase regulator activity IEP Enrichment
MF GO:0019887 protein kinase regulator activity IEP Enrichment
MF GO:0035091 phosphatidylinositol binding IEP Enrichment
InterPro domains Description Start Stop
IPR000504 RRM_dom 48 117
No external refs found!