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  5. Vocar.0009s0254.1

Vocar.0009s0254.1 (32893207)


Aliases : 32893207

Description : WD40 repeat [Interproscan].


Gene families : OG_01_0000992 (OrthoFinder) Phylogenetic Tree(s): OG0000992_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0009s0254.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Cre01.g039500 30789378, FAP89 Notchless protein homolog OS=Arabidopsis thaliana 0.03 OrthoFinder
Cre03.g152550 30787446 Guanine nucleotide-binding protein subunit beta-like... 0.05 OrthoFinder
Cre04.g222000 30791437 Notchless protein homolog OS=Arabidopsis thaliana 0.05 OrthoFinder
Cre10.g465650 30790623 Dynein assembly factor with WDR repeat domains 1... 0.03 OrthoFinder
Cre12.g512750 30792393, TEF20 Dynein assembly factor with WDR repeat domains 1... 0.07 OrthoFinder
Cre17.g723450 30782721 Probable cytosolic iron-sulfur protein assembly protein... 0.03 OrthoFinder
Vocar.0001s0375.1 32884383 WD40 repeat; Anaphase-promoting complex subunit 4, WD40... 0.03 OrthoFinder
Vocar.0008s0315.1 32896992 WD40 repeat [Interproscan]. 0.03 OrthoFinder
Vocar.0016s0172.1 32897869 WD40 repeat [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01002419.1_cds_GFH24015.1_18492 HaLaN_21727, GFH24015 Hypothetical protein 0.02 OrthoFinder
lcl|BLLF01004823.1_cds_GFH30307.1_24784 HaLaN_29134, GFH30307 Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 1655 1689
IPR001680 WD40_repeat 1494 1549
IPR001680 WD40_repeat 2270 2310
IPR001680 WD40_repeat 1572 1604
IPR001680 WD40_repeat 1454 1476
IPR001680 WD40_repeat 2326 2362
IPR001680 WD40_repeat 1942 1979
IPR001680 WD40_repeat 2070 2112
IPR001680 WD40_repeat 2417 2453
IPR001680 WD40_repeat 1803 1837
IPR001680 WD40_repeat 2040 2063
IPR001680 WD40_repeat 1904 1937
IPR001680 WD40_repeat 1610 1647
IPR001680 WD40_repeat 2221 2259
IPR001680 WD40_repeat 2163 2196
IPR001680 WD40_repeat 1234 1275
IPR001680 WD40_repeat 1984 2021
IPR001680 WD40_repeat 2387 2412
IPR001680 WD40_repeat 2117 2155
IPR001680 WD40_repeat 1854 1889
No external refs found!