Vocar.0009s0036.1 (32893484)

Aliases : 32893484

Description : ABC transporter-like [Interproscan].

Gene families : OG_01_0001307 (OrthoFinder) Phylogenetic Tree(s): OG0001307_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Vocar.0009s0036.1
Cluster	HCCA: Cluster_1

Target	Alias	Description	ECC score	Gene Family Method
Cre13.g580300	30783939	ABC transporter I family member 19 OS=Arabidopsis thaliana	0.05	OrthoFinder
Cre17.g731050	30782523	ABC transporter I family member 20 OS=Arabidopsis thaliana	0.05	OrthoFinder
Cz04g21110.t1	No alias	ABC transporter-like [Interproscan].	0.03	OrthoFinder
Cz08g22150.t1	No alias	ABC transporter-like [Interproscan].	0.04	OrthoFinder
OT_01G01310.1	No alias	ABC transporter-like [Interproscan].	0.04	OrthoFinder
OT_09G00130.1	No alias	ABC transporter-like [Interproscan].	0.04	OrthoFinder
Transcript_contig_4264	4264	ABC transporter-like [Interproscan].	0.01	OrthoFinder
XM_002504365.1	MICPUN_85209, 85209	ABC transporter-like [Interproscan].	0.02	OrthoFinder
XM_002506008.1	MICPUN_109515, 109515	ABC transporter-like [Interproscan].	0.02	OrthoFinder
lcl\|BLLF01000320.1_cds_GFH10491.1_4968	HaLaN_05813, GFH10491	ABC transporter domain-containing protein	0.03	OrthoFinder
lcl\|BLLF01000494.1_cds_GFH12356.1_6833	HaLaN_08024, GFH12356	ABC transporter domain-containing protein	0.04	OrthoFinder
lcl\|LHPG02000023.1_cds_PRW20596.1_5502	PRW20596	ABC transporter I family member 20	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016887	ATPase	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004784	superoxide dismutase activity	IEP	Enrichment
BP	GO:0006801	superoxide metabolic process	IEP	Enrichment
MF	GO:0016209	antioxidant activity	IEP	Enrichment
MF	GO:0016721	oxidoreductase activity, acting on superoxide radicals as acceptor	IEP	Enrichment
BP	GO:0072593	reactive oxygen species metabolic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	100	246

External Links

No external refs found!