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  5. Vocar.0008s0356.1

Vocar.0008s0356.1 (32897254)


Aliases : 32897254

Description : DNA/RNA-binding protein Alba-like [Interproscan].


Gene families : OG_01_0004488 (OrthoFinder) Phylogenetic Tree(s): OG0004488_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0008s0356.1
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000383.54 tig00000383_g24668.t1 Uncharacterized protein At2g34160 OS=Arabidopsis thaliana 0.03 OrthoFinder
Dusal.1185s00001.1 33192682 DNA/RNA-binding protein Alba-like [Interproscan]. 0.02 OrthoFinder
XM_002502422.1 MICPUN_58499, 58499 DNA/RNA-binding protein Alba-like [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Enrichment
CC GO:0000445 THO complex part of transcription export complex IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR002775 DNA/RNA-bd_Alba-like 24 73
No external refs found!