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  5. Vocar.0008s0174.1

Vocar.0008s0174.1 (32897045)


Aliases : 32897045

Description : GTP binding domain; GTP1/OBG domain [Interproscan].


Gene families : OG_01_0000470 (OrthoFinder) Phylogenetic Tree(s): OG0000470_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0008s0174.1
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
Cre09.g395600 30780716 Probable GTP-binding protein OBGC2 OS=Oryza sativa... 0.03 OrthoFinder
Cre10.g433100 30789840 Probable GTP-binding protein OBGC1, chloroplastic... 0.04 OrthoFinder
EOD06929 No alias Spo0B-associated GTPase [Ensembl]. 0.02 OrthoFinder
OT_07G04130.1 No alias GTP binding domain; GTP1/OBG domain [Interproscan]. 0.04 OrthoFinder
Transcript_contig_57944 57944 GTP binding domain; GTP1/OBG domain [Interproscan]. 0.01 OrthoFinder
XM_002499910.1 MICPUN_78980, 78980 GTP-binding protein OBG, C-terminal; GTP binding domain;... 0.05 OrthoFinder
XM_003055157.1 MicpuC2_43864, 43864 GTP-binding protein OBG, C-terminal; GTP binding domain;... 0.03 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39081.1_2771 PRW39081 Putative GTP-binding mitochondrial 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
CC GO:0000808 origin recognition complex IEP Enrichment
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002098 tRNA wobble uridine modification IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity IEP Enrichment
CC GO:0005664 nuclear origin of replication recognition complex IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0009435 NAD biosynthetic process IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Enrichment
BP GO:0019362 pyridine nucleotide metabolic process IEP Enrichment
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0033588 elongator holoenzyme complex IEP Enrichment
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR006169 GTP1_OBG_dom 194 315
IPR006073 GTP-bd 346 467
No external refs found!