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  5. Vocar.0008s0132.1

Vocar.0008s0132.1 (32897309)


Aliases : 32897309

Description : Hypothetical protein


Gene families : OG_01_0000397 (OrthoFinder) Phylogenetic Tree(s): OG0000397_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0008s0132.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Cre17.g720750 30782685 No description available 0.02 OrthoFinder
Cz06g32020.t1 No alias Polymerase, nucleotidyl transferase domain;... 0.03 OrthoFinder
Dusal.0111s00011.1 33199821 PAP/25A-associated; Polymerase, nucleotidyl transferase... 0.02 OrthoFinder
XM_002508038.1 MICPUN_60459, 60459 Polymerase, nucleotidyl transferase domain [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59743.1_6818 PRW59743 Non-canonical poly(A) RNA polymerase PAPD5 0.03 OrthoFinder
lcl|VRMN01000016.1_cds_KAA8491094.1_9851 KAA8491094 Non-canonical poly(A) RNA polymerase protein Trf4-1 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP Enrichment
MF GO:0001671 ATPase activator activity IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005534 galactose binding IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment

No InterPro domains available for this sequence

No external refs found!