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  5. Vocar.0007s0333.1

Vocar.0007s0333.1 (32888233)


Aliases : 32888233

Description : Ion transport domain; Cyclic nucleotide-binding domain [Interproscan].


Gene families : OG_01_0000079 (OrthoFinder) Phylogenetic Tree(s): OG0000079_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0007s0333.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000711.58 tig00000711_g3420.t1 Potassium channel KOR1 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder
Cre02.g098750 30785469 No description available 0.03 OrthoFinder
Cre12.g553450 30793567, CNG1 Potassium channel AKT2/3 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre12.g553900 30793362, CNG2 Potassium channel AKT2/3 OS=Arabidopsis thaliana 0.04 OrthoFinder
Cre16.g670754 30777028 Potassium channel SKOR OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre17.g706900 30782036, CNG3 Solute transport.channels.VIC superfamily.voltage-gated... 0.02 OrthoFinder
Cz15g15200.t1 No alias Ion transport domain; Cyclic nucleotide-binding domain... 0.03 OrthoFinder
SymbC1.scaffold5511.5 5511.5 Cyclic nucleotide-binding domain [Interproscan]. 0.01 OrthoFinder
Vocar.0001s0514.1 32885291 Ion transport domain; Cyclic nucleotide-binding domain... 0.02 OrthoFinder
Vocar.0083s0013.1 32896131 Ion transport domain; Cyclic nucleotide-binding domain... 0.03 OrthoFinder
XM_002501236.1 MICPUN_52700, 52700 Voltage-gated ion channel superfamily 0.02 OrthoFinder
lcl|BLLF01000349.1_cds_GFH10810.1_5287 HaLaN_06193, GFH10810 Cyclic nucleotide-binding domain-containing protein 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 198 507
IPR000595 cNMP-bd_dom 602 684
No external refs found!