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  5. Vocar.0007s0085.1

Vocar.0007s0085.1 (32887902)


Aliases : 32887902

Description : tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 [Interproscan].


Gene families : OG_01_0004180 (OrthoFinder) Phylogenetic Tree(s): OG0004180_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0007s0085.1
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
Cre12.g543100 30792753 RNA processing.RNA modification.rRNA/tRNA... 0.03 OrthoFinder
Cz07g21060.t1 No alias tRNA (adenine(58)-N(1))-methyltransferase non-catalytic... 0.02 OrthoFinder
EOD37366 No alias tRNA (adenine(58)-N(1))-methyltransferase non-catalytic... 0.01 OrthoFinder
OT_05G03670.1 No alias tRNA (adenine(58)-N(1))-methyltransferase non-catalytic... 0.03 OrthoFinder
PTI_28G00370.1 No alias tRNA (adenine(58)-N(1))-methyltransferase non-catalytic... 0.06 OrthoFinder
XM_002506620.1 MICPUN_104523, 104523 tRNA (adenine(58)-N(1))-methyltransferase non-catalytic... 0.03 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61100.1_469 PRW61100 TRNA (adenine(58)-N(1))-methyltransferase non-catalytic... 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0030488 tRNA methylation IEA Interproscan
CC GO:0031515 tRNA (m1A) methyltransferase complex IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002949 tRNA threonylcarbamoyladenosine modification IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003919 FMN adenylyltransferase activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
BP GO:0008272 sulfate transport IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
MF GO:0015116 sulfate transmembrane transporter activity IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
BP GO:0070525 tRNA threonylcarbamoyladenosine metabolic process IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
BP GO:0072348 sulfur compound transport IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR017423 TRM6 7 243
No external refs found!