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  5. Vocar.0006s0471.1

Vocar.0006s0471.1 (32894239)


Aliases : 32894239

Description : MIF4G-like, type 1 [Interproscan].


Gene families : OG_01_0004541 (OrthoFinder) Phylogenetic Tree(s): OG0004541_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0006s0471.1
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021589.24 tig00021589_g22732.t1 RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA... 0.02 OrthoFinder
Cre12.g524100 30793624 RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA... 0.04 OrthoFinder
Cz05g13090.t1 No alias MIF4G-like, type 2; MIF4G-like, type 3; MIF4G-like, type... 0.02 OrthoFinder
Dusal.0756s00004.1 33189156 MIF4G-like, type 3 [Interproscan]. 0.03 OrthoFinder
EOD22541 No alias MIF4G-like, type 2 [Interproscan]. 0.02 OrthoFinder
XM_002499537.1 MICPUN_56144, 56144 MIF4G-like, type 1; MIF4G-like, type 2; MIF4G-like, type... 0.02 OrthoFinder
lcl|LHPG02000028.1_cds_PRW05828.1_5995 PRW05828 Nuclear cap-binding subunit 1 isoform A 0.02 OrthoFinder
lcl|LHPG02000028.1_cds_PRW05829.1_5996 PRW05829 Nuclear cap-binding subunit 1 isoform B 0.02 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494967.1_3497 KAA8494967 Nuclear cap-binding protein subunit 1 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0016070 RNA metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003689 DNA clamp loader activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005663 DNA replication factor C complex IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006606 protein import into nucleus IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
BP GO:0034504 protein localization to nucleus IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051170 import into nucleus IEP Enrichment
MF GO:0061608 nuclear import signal receptor activity IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140142 nucleocytoplasmic carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR015172 MIF4G-like_typ-1 506 647
No external refs found!