Vocar.0006s0354.1 (32894312)


Aliases : 32894312

Description : SecA DEAD-like, N-terminal; SecA, preprotein cross-linking domain; SecA Wing/Scaffold [Interproscan].


Gene families : OG_01_0001023 (OrthoFinder) Phylogenetic Tree(s): OG0001023_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0006s0354.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
OT_01G04130.1 No alias SecA, preprotein cross-linking domain; SecA... 0.03 OrthoFinder
PTI_01G02660.1 No alias SecA, preprotein cross-linking domain; SecA DEAD-like,... 0.02 OrthoFinder
Sro51_chlor_g029880.1 SecA SecA 0.02 OrthoFinder
Sro611_g175330.1 Contig1882.g16414 Protein translocase subunit SecA 0.01 OrthoFinder
TPCG02000.1 No alias SecA, preprotein cross-linking domain; SecA... 0.03 OrthoFinder
TPCG03000.1 No alias SecA, preprotein cross-linking domain; SecA... 0.03 OrthoFinder
Transcript_contig_54417 54417 SecA, preprotein cross-linking domain; SecA... 0.02 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56541.1_9593 PRW56541 Translocase subunit chloroplastic isoform C 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0017038 protein import IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003989 acetyl-CoA carboxylase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004820 glycine-tRNA ligase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006426 glycyl-tRNA aminoacylation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
MF GO:0016421 CoA carboxylase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR011116 SecA_Wing/Scaffold 761 977
IPR011130 SecA_preprotein_X-link_dom 301 407
IPR011115 SecA_DEAD 72 450
No external refs found!