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  5. Vocar.0006s0331.1

Vocar.0006s0331.1 (32894198)


Aliases : 32894198

Description : Elongation factor EFG, domain V-like; Translation elongation factor EFG/EF2, domain IV; Transcription factor, GTP-binding domain; Elongation Factor G, domain II; Translation elongation factor EFTu-like, domain 2 [Interproscan].


Gene families : OG_01_0000224 (OrthoFinder) Phylogenetic Tree(s): OG0000224_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0006s0331.1
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020904.69 tig00020904_g15202.t1 RNA processing.RNA splicing.U2-type-intron-specific... 0.02 OrthoFinder
Cz02g31270.t1 No alias Translation elongation factor EFG/EF2, domain IV;... 0.02 OrthoFinder
Cz04g12070.t1 No alias Translation elongation factor EFTu-like, domain 2;... 0.02 OrthoFinder
EOD10726 No alias Elongation factor EFG, domain V-like; 116kDa U5 small... 0.02 OrthoFinder
EOD21720 No alias Elongation factor EFG, domain V-like; Transcription... 0.02 OrthoFinder
OT_14G01740.1 No alias Translation elongation factor EFTu-like, domain 2;... 0.03 OrthoFinder
TP01G09590.1 No alias Elongation Factor G, domain II; Transcription factor,... 0.01 OrthoFinder
Transcript_contig_54328 54328 Translation elongation factor EFTu-like, domain 2;... 0.03 OrthoFinder
XM_003058246.1 MicpuC2_47165, 47165 Elongation factor tu gtp-binding domain protein 2 (EF-TU) 0.02 OrthoFinder
XM_003059631.1 MicpuC2_27460, 27460 Elongation factor EFG, domain V-like; Transcription... 0.03 OrthoFinder
lcl|BLLF01006069.1_cds_GFH31923.1_26400 HaLaN_31054, GFH31923 Elongation factor 0.03 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60836.1_4725 PRW60836 116 kDa U5 small nuclear ribonucleo component-like isoform A 0.03 OrthoFinder
lcl|LHPG02000012.1_cds_PRW44991.1_1795 PRW44991 Elongation factor 2 0.06 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496522.1_251 KAA8496522 Elongation factor 2 0.02 OrthoFinder
lcl|VRMN01000017.1_cds_KAA8490930.1_6133 KAA8490930 Ribosome assembly protein 1 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Enrichment
MF GO:0003954 NADH dehydrogenase activity IEP Enrichment
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Enrichment
MF GO:0004576 oligosaccharyl transferase activity IEP Enrichment
MF GO:0005092 GDP-dissociation inhibitor activity IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
BP GO:0007264 small GTPase mediated signal transduction IEP Enrichment
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
MF GO:0015002 obsolete heme-copper terminal oxidase activity IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
MF GO:0048038 quinone binding IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000795 T_Tr_GTP-bd_dom 17 344
IPR041095 EFG_II 489 551
IPR005517 Transl_elong_EFG/EF2_IV 609 721
IPR000640 EFG_V-like 726 813
IPR004161 EFTu-like_2 396 470
No external refs found!