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  5. Cpa|evm.model.tig00000241.79

Cpa|evm.model.tig00000241.79 (tig00000241_g20941.t1)


Aliases : tig00000241_g20941.t1

Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL35 component


Gene families : OG_01_0003855 (OrthoFinder) Phylogenetic Tree(s): OG0003855_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000241.79
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Cre14.g617900 30776584, RPL35 Protein biosynthesis.cytosolic ribosome.large subunit... 0.19 OrthoFinder
Cz12g12300.t1 No alias Ribosomal protein L29/L35 [Interproscan]. 0.17 OrthoFinder
Dusal.0936s00001.1 33189602 Ribosomal protein L29/L35 [Interproscan]. 0.08 OrthoFinder
EOD14796 No alias Ribosomal protein L29/L35 [Interproscan]. 0.09 OrthoFinder
OT_05G01490.1 No alias Ribosomal protein L29/L35 [Interproscan]. 0.11 OrthoFinder
PTI_06G01310.1 No alias Ribosomal protein L29/L35 [Interproscan]. 0.19 OrthoFinder
Sro1394_g268940.1 Contig598.g7460 60S ribosomal protein L35 0.23 OrthoFinder
SymbC1.scaffold356.4 356.4 Ribosomal protein L29/L35 [Interproscan]. 0.02 OrthoFinder
TP12G02050.1 No alias Ribosomal protein L29/L35 [Interproscan]. 0.21 OrthoFinder
Vocar.0001s1458.1 32885943 Ribosomal protein L29/L35 [Interproscan]. 0.06 OrthoFinder
XM_002507650.1 MICPUN_107597, 107597 Ribosomal protein L29/L35 [Interproscan]. 0.14 OrthoFinder
XM_003056132.1 MicpuC2_49485, 49485 60S ribosomal protein L35 (RPL35) 0.17 OrthoFinder
lcl|LHPG02000021.1_cds_PRW20803.1_5002 PRW20803 60S ribosomal L35-like 0.09 OrthoFinder
lcl|VRMN01000009.1_cds_KAA8492667.1_9360 KAA8492667 60S ribosomal protein L35 0.14 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005669 transcription factor TFIID complex IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006417 regulation of translation IEP Enrichment
BP GO:0006448 regulation of translational elongation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009891 positive regulation of biosynthetic process IEP Enrichment
BP GO:0009893 positive regulation of metabolic process IEP Enrichment
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Enrichment
BP GO:0010608 posttranscriptional regulation of gene expression IEP Enrichment
BP GO:0010628 positive regulation of gene expression IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0031325 positive regulation of cellular metabolic process IEP Enrichment
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Enrichment
BP GO:0032268 regulation of cellular protein metabolic process IEP Enrichment
BP GO:0032270 positive regulation of cellular protein metabolic process IEP Enrichment
BP GO:0034248 regulation of cellular amide metabolic process IEP Enrichment
BP GO:0034250 positive regulation of cellular amide metabolic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
MF GO:0043022 ribosome binding IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0045727 positive regulation of translation IEP Enrichment
BP GO:0045901 positive regulation of translational elongation IEP Enrichment
BP GO:0048518 positive regulation of biological process IEP Enrichment
BP GO:0048522 positive regulation of cellular process IEP Enrichment
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0051247 positive regulation of protein metabolic process IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001854 Ribosomal_L29/L35 8 63
No external refs found!