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  5. Vocar.0006s0303.1

Vocar.0006s0303.1 (32893913)


Aliases : 32893913

Description : Ribosomal protein S17/S11; 40S ribosomal protein S11, N-terminal [Interproscan].


Gene families : OG_01_0003480 (OrthoFinder) Phylogenetic Tree(s): OG0003480_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0006s0303.1
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000551.22 tig00000551_g2043.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder
Cre12.g514500 30792578, RPS11 Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 OrthoFinder
Cz02g12020.t1 No alias Ribosomal protein S17/S11; 40S ribosomal protein S11,... 0.04 OrthoFinder
EOD05251 No alias Ribosomal protein S17/S11; 40S ribosomal protein S11,... 0.03 OrthoFinder
OT_06G01520.1 No alias 40S ribosomal protein S11, N-terminal; Ribosomal protein... 0.03 OrthoFinder
PTI_12G03740.1 No alias Ribosomal protein S17/S11; 40S ribosomal protein S11,... 0.03 OrthoFinder
Sro154_g070110.1 Contig2716.g21889 40S ribosomal protein S11 0.03 OrthoFinder
TP05G00420.1 No alias Ribosomal protein S17/S11; 40S ribosomal protein S11,... 0.05 OrthoFinder
XM_002501400.1 MICPUN_81184, 81184 Ribosomal protein 0.04 OrthoFinder
lcl|BLLF01005325.1_cds_GFH31049.1_25526 HaLaN_30009, GFH31049 Ribosomal_S17_N domain-containing protein 0.04 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61173.1_440 PRW61173 40S ribosomal S11 0.03 OrthoFinder
lcl|VRMN01000015.1_cds_KAA8491213.1_5841 KAA8491213 40S ribosomal protein S11 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004784 superoxide dismutase activity IEP Enrichment
BP GO:0006488 dolichol-linked oligosaccharide biosynthetic process IEP Enrichment
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000266 Ribosomal_S17/S11 73 140
IPR032440 Ribosomal_S11_N 4 71
No external refs found!