Vocar.0006s0271.1 (32894224)

Aliases : 32894224

Description : Translation elongation factor EFTu/EF1A, C-terminal; Transcription factor, GTP-binding domain; Translation elongation factor EFTu-like, domain 2 [Interproscan].

Gene families : OG_01_0000147 (OrthoFinder) Phylogenetic Tree(s): OG0000147_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Vocar.0006s0271.1
Cluster	HCCA: Cluster_65

Target	Alias	Description	ECC score	Gene Family Method
Dusal.0162s00022.1	33196140	Transcription factor, GTP-binding domain; Translation...	0.02	OrthoFinder
EOD16607	No alias	Translation elongation factor EFTu-like, domain 2;...	0.02	OrthoFinder
EOD35459	No alias	Putative EF-1 alpha/Tu like protein [Ensembl].	0.02	OrthoFinder
OT_13G02300.1	No alias	Translation elongation factor EFTu/EF1A, C-terminal;...	0.03	OrthoFinder
PTI_13G03040.1	No alias	Translation elongation factor EFTu-like, domain 2;...	0.02	OrthoFinder
PTI_18G02730.1	No alias	Translation elongation factor EFTu/EF1A, C-terminal;...	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003682	chromatin binding	IEP	Enrichment
MF	GO:0005096	GTPase activator activity	IEP	Enrichment
MF	GO:0008047	enzyme activator activity	IEP	Enrichment
MF	GO:0008097	5S rRNA binding	IEP	Enrichment
MF	GO:0016603	glutaminyl-peptide cyclotransferase activity	IEP	Enrichment
MF	GO:0016746	acyltransferase activity	IEP	Enrichment
MF	GO:0016755	aminoacyltransferase activity	IEP	Enrichment
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Enrichment
MF	GO:0016836	hydro-lyase activity	IEP	Enrichment
BP	GO:0017186	peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase	IEP	Enrichment
BP	GO:0018199	peptidyl-glutamine modification	IEP	Enrichment
MF	GO:0019843	rRNA binding	IEP	Enrichment
CC	GO:0030176	integral component of endoplasmic reticulum membrane	IEP	Enrichment
MF	GO:0030234	enzyme regulator activity	IEP	Enrichment
MF	GO:0030695	GTPase regulator activity	IEP	Enrichment
CC	GO:0031227	intrinsic component of endoplasmic reticulum membrane	IEP	Enrichment
CC	GO:0031300	intrinsic component of organelle membrane	IEP	Enrichment
CC	GO:0031301	integral component of organelle membrane	IEP	Enrichment
MF	GO:0052855	ADP-dependent NAD(P)H-hydrate dehydratase activity	IEP	Enrichment
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Enrichment
MF	GO:0098772	molecular function regulator	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000795	T_Tr_GTP-bd_dom	7	244
IPR004160	Transl_elong_EFTu/EF1A_C	354	460
IPR004161	EFTu-like_2	273	345

External Links

No external refs found!

Vocar.0006s0271.1 (32894224)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation