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  5. Vocar.0006s0178.1

Vocar.0006s0178.1 (32893970)


Aliases : 32893970

Description : 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Interproscan].


Gene families : OG_01_0002289 (OrthoFinder) Phylogenetic Tree(s): OG0002289_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0006s0178.1
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
Cre12.g503550 30793082 Secondary metabolism.terpenoids.methylerythritol... 0.06 OrthoFinder
OT_11G00050.1 No alias 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase... 0.02 OrthoFinder
PTI_08G01900.1 No alias 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase... 0.02 OrthoFinder
Sro447_g144880.1 Contig3064.g24410 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 0.03 OrthoFinder
XM_002509327.1 MICPUN_113519, 113519 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase 0.05 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39185.1_2630 PRW39185 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity IEA Interproscan
BP GO:0016114 terpenoid biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
BP GO:0006643 membrane lipid metabolic process IEP Enrichment
BP GO:0006664 glycolipid metabolic process IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
BP GO:0009247 glycolipid biosynthetic process IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0015994 chlorophyll metabolic process IEP Enrichment
BP GO:0015995 chlorophyll biosynthetic process IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Enrichment
BP GO:0046467 membrane lipid biosynthetic process IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1903509 liposaccharide metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR003526 MECDP_synthase 49 201
No external refs found!