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  5. Vocar.0006s0089.1

Vocar.0006s0089.1 (32893873)


Aliases : 32893873

Description : PdxS/SNZ N-terminal domain [Interproscan].


Gene families : OG_01_0002309 (OrthoFinder) Phylogenetic Tree(s): OG0002309_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0006s0089.1
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000254.47 tig00000254_g22499.t1 Coenzyme metabolism.pyridoxalphosphate... 0.02 OrthoFinder
Dusal.0240s00014.1 33202730 PdxS/SNZ N-terminal domain [Interproscan]. 0.01 OrthoFinder
PTI_19G01670.1 No alias PdxS/SNZ N-terminal domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01001775.1_cds_GFH21184.1_15661 HaLaN_18433, GFH21184 SOR_SNZ domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Enrichment
CC GO:0000428 DNA-directed RNA polymerase complex IEP Enrichment
MF GO:0002161 aminoacyl-tRNA editing activity IEP Enrichment
MF GO:0004526 ribonuclease P activity IEP Enrichment
MF GO:0004549 tRNA-specific ribonuclease activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005666 RNA polymerase III complex IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006383 transcription by RNA polymerase III IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
BP GO:0010024 phytochromobilin biosynthetic process IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Enrichment
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0030880 RNA polymerase complex IEP Enrichment
CC GO:0031082 BLOC complex IEP Enrichment
CC GO:0031083 BLOC-1 complex IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0043461 proton-transporting ATP synthase complex assembly IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0050897 cobalt ion binding IEP Enrichment
BP GO:0051202 phytochromobilin metabolic process IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0120227 acyl-CoA binding IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901567 fatty acid derivative binding IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR033755 PdxS/SNZ_N 8 213
No external refs found!