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  5. Vocar.0006s0026.1

Vocar.0006s0026.1 (32894018)


Aliases : 32894018

Description : Ankyrin repeat-containing domain; Ankyrin repeat [Interproscan].


Gene families : OG_01_0000281 (OrthoFinder) Phylogenetic Tree(s): OG0000281_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0006s0026.1
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
Cz04g33240.t1 No alias Ankyrin repeats (many copies); Zinc finger, C3HC4 type... 0.02 OrthoFinder
Dusal.0364s00003.1 33192087 Ankyrin repeat-containing domain [Interproscan]. 0.02 OrthoFinder
Dusal.0364s00008.1 33192081 Ankyrin repeat-containing domain [Interproscan]. 0.03 OrthoFinder
EOD21896 No alias Ankyrin repeat-containing domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_640 640 Ankyrin repeat-containing domain; Ankyrin repeat [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39137.1_2634 PRW39137 Putative E3 ubiquitin-ligase XBOS32 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003873 6-phosphofructo-2-kinase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
BP GO:0006000 fructose metabolic process IEP Enrichment
MF GO:0008443 phosphofructokinase activity IEP Enrichment
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
MF GO:0019200 carbohydrate kinase activity IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
MF GO:0033897 ribonuclease T2 activity IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 180 248
IPR002110 Ankyrin_rpt 144 171
No external refs found!