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  5. Vocar.0006s0022.1

Vocar.0006s0022.1 (32894246)


Aliases : 32894246

Description : Chlorophyll A-B binding protein [Interproscan].


Gene families : OG_01_0000479 (OrthoFinder) Phylogenetic Tree(s): OG0000479_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0006s0022.1
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Cre07.g320400 30774456 Photosynthesis.photophosphorylation.photosystem... 0.13 OrthoFinder
Cre07.g320450 30775051 Photosynthesis.photophosphorylation.photosystem... 0.16 OrthoFinder
Cre08.g384650 30773689 Photosynthesis.photophosphorylation.photosystem... 0.13 OrthoFinder
Cre09.g394325 30780217, ELI3 Photosynthesis.photophosphorylation.photosystem... 0.17 OrthoFinder
Cre14.g626750 30776408 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder
Cre16.g679250 30778123, ELI1 Photosynthesis.photophosphorylation.photosystem... 0.06 OrthoFinder
Cz07g29280.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Cz07g30110.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
Cz08g00120.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.07 OrthoFinder
Cz14g24190.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Cz17g16050.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.06 OrthoFinder
OT_13G02960.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.07 OrthoFinder
Transcript_contig_55820 55820 Hypothetical protein 0.02 OrthoFinder
Transcript_contig_78826 78826 Chlorophyll A-B binding protein [Interproscan]. 0.01 OrthoFinder
XM_002505237.1 MICPUN_62633, 62633 Early light induced protein-like 3, chloroplast... 0.02 OrthoFinder
XM_002506082.1 MICPUN_63993, 63993 Early light induced protein-like protein, chloroplast... 0.02 OrthoFinder
lcl|BLLF01000380.1_cds_GFH11164.1_5641 HaLaN_06615, GFH11164 Chloroplast carotene biosynthesis related protein 0.02 OrthoFinder
lcl|BLLF01000628.1_cds_GFH13571.1_8048 HaLaN_09486, GFH13571 Carotene biosynthesis-related protein 0.02 OrthoFinder
lcl|BLLF01001239.1_cds_GFH18033.1_12510 HaLaN_14768, GFH18033 Chloroplast carotene biosynthesis related protein 0.02 OrthoFinder
lcl|BLLF01001239.1_cds_GFH18034.1_12511 HaLaN_14769, GFH18034 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01002554.1_cds_GFH24512.1_18989 HaLaN_22321, GFH24512 Desiccation stress protein DSP-22, chloroplastic 0.03 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60462.1_4167 PRW60462 Early light-inducible 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 98 149
No external refs found!