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  5. Vocar.0005s0290.1

Vocar.0005s0290.1 (32883675)


Aliases : 32883675

Description : Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain [Interproscan].


Gene families : OG_01_0000664 (OrthoFinder) Phylogenetic Tree(s): OG0000664_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0005s0290.1
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Cz13g11070.t1 No alias Tetrahydrofolate dehydrogenase/cyclohydrolase,... 0.03 OrthoFinder
Transcript_contig_57758 57758 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0031123 RNA 3'-end processing IEP Enrichment
BP GO:0031124 mRNA 3'-end processing IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
CC GO:0035658 Mon1-Ccz1 complex IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
CC GO:0090730 Las1 complex IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1902555 endoribonuclease complex IEP Enrichment
CC GO:1902911 protein kinase complex IEP Enrichment
CC GO:1905354 exoribonuclease complex IEP Enrichment
InterPro domains Description Start Stop
IPR020631 THF_DH/CycHdrlase_NAD-bd_dom 511 553
IPR020631 THF_DH/CycHdrlase_NAD-bd_dom 190 262
IPR020631 THF_DH/CycHdrlase_NAD-bd_dom 358 431
IPR020630 THF_DH/CycHdrlase_cat_dom 71 187
No external refs found!