Aliases : 32883971
Description : Formamidopyrimidine-DNA glycosylase, catalytic domain; DNA glycosylase/AP lyase, H2TH DNA-binding [Interproscan].
Gene families : OG_01_0003087 (OrthoFinder) Phylogenetic Tree(s): OG0003087_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Vocar.0005s0225.1 | |
Cluster | HCCA: Cluster_49 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
lcl|BLLF01000775.1_cds_GFH14858.1_9335 | HaLaN_10985, GFH14858 | H2TH domain-containing protein | 0.02 | OrthoFinder | |
lcl|LHPG02000025.1_cds_PRW20199.1_5716 | PRW20199 | Formamidopyrimidine-DNA glycosylase isoform X2 | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003684 | damaged DNA binding | IEA | Interproscan |
MF | GO:0003906 | DNA-(apurinic or apyrimidinic site) endonuclease activity | IEA | Interproscan |
BP | GO:0006284 | base-excision repair | IEA | Interproscan |
BP | GO:0006289 | nucleotide-excision repair | IEA | Interproscan |
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003916 | DNA topoisomerase activity | IEP | Enrichment |
MF | GO:0003917 | DNA topoisomerase type I (single strand cut, ATP-independent) activity | IEP | Enrichment |
MF | GO:0003954 | NADH dehydrogenase activity | IEP | Enrichment |
MF | GO:0003955 | NAD(P)H dehydrogenase (quinone) activity | IEP | Enrichment |
BP | GO:0006265 | DNA topological change | IEP | Enrichment |
BP | GO:0006996 | organelle organization | IEP | Enrichment |
MF | GO:0008137 | NADH dehydrogenase (ubiquinone) activity | IEP | Enrichment |
MF | GO:0008171 | O-methyltransferase activity | IEP | Enrichment |
MF | GO:0009055 | electron transfer activity | IEP | Enrichment |
CC | GO:0009521 | photosystem | IEP | Enrichment |
CC | GO:0009523 | photosystem II | IEP | Enrichment |
CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Enrichment |
BP | GO:0015979 | photosynthesis | IEP | Enrichment |
MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Enrichment |
MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | Enrichment |
MF | GO:0019842 | vitamin binding | IEP | Enrichment |
CC | GO:0019898 | extrinsic component of membrane | IEP | Enrichment |
MF | GO:0030170 | pyridoxal phosphate binding | IEP | Enrichment |
MF | GO:0050136 | NADH dehydrogenase (quinone) activity | IEP | Enrichment |
BP | GO:0051276 | chromosome organization | IEP | Enrichment |
MF | GO:0070279 | vitamin B6 binding | IEP | Enrichment |
BP | GO:0071103 | DNA conformation change | IEP | Enrichment |
CC | GO:1990204 | oxidoreductase complex | IEP | Enrichment |
No external refs found! |