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  5. Vocar.0005s0150.1

Vocar.0005s0150.1 (32883894)


Aliases : 32883894

Description : Zinc-finger of C2H2 type; Ribosomal protein L7Ae/L30e/S12e/Gadd45 [Interproscan].


Gene families : OG_01_0002409 (OrthoFinder) Phylogenetic Tree(s): OG0002409_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0005s0150.1
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
OT_04G05130.1 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45; Zinc-finger of... 0.03 OrthoFinder
lcl|BLLF01003569.1_cds_GFH27669.1_22146 HaLaN_26032, GFH27669 C2H2-type domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
MF GO:0061630 ubiquitin protein ligase activity IEP Enrichment
MF GO:0061659 ubiquitin-like protein ligase activity IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
InterPro domains Description Start Stop
IPR004038 Ribosomal_L7Ae/L30e/S12e/Gad45 2598 2689
No external refs found!