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  5. Vocar.0004s0500.1

Vocar.0004s0500.1 (32889888)


Aliases : 32889888

Description : Photosystem I reaction centre subunit N, chloroplastic [Interproscan].


Gene families : OG_01_0009392 (OrthoFinder) Phylogenetic Tree(s): OG0009392_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0004s0500.1
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
Cre02.g082500 30786029, PSAN Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.17 OrthoFinder
Cz17g10010.t1 No alias Photosystem I reaction centre subunit N, chloroplastic... 0.09 OrthoFinder
OT_06G00280.1 No alias Photosystem I reaction centre subunit N, chloroplastic... 0.07 OrthoFinder
XM_002500771.1 MICPUN_93625, 93625 Photosystem I subunit N, chloroplast precursor (PSAN) 0.07 OrthoFinder
XM_003059356.1 MicpuC2_58597, 58597 Photosystem I subunit N, chloroplast precursor (PsaN) 0.09 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0004140 dephospho-CoA kinase activity IEP Enrichment
MF GO:0004455 ketol-acid reductoisomerase activity IEP Enrichment
MF GO:0004618 phosphoglycerate kinase activity IEP Enrichment
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Enrichment
BP GO:0009081 branched-chain amino acid metabolic process IEP Enrichment
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Enrichment
BP GO:0009150 purine ribonucleotide metabolic process IEP Enrichment
BP GO:0009259 ribonucleotide metabolic process IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009538 photosystem I reaction center IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0010109 regulation of photosynthesis IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0010242 oxygen evolving activity IEP Enrichment
BP GO:0015936 coenzyme A metabolic process IEP Enrichment
BP GO:0015937 coenzyme A biosynthetic process IEP Enrichment
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
BP GO:0019693 ribose phosphate metabolic process IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Enrichment
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Enrichment
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Enrichment
BP GO:0042548 regulation of photosynthesis, light reaction IEP Enrichment
BP GO:0042549 photosystem II stabilization IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0072521 purine-containing compound metabolic process IEP Enrichment
BP GO:1901135 carbohydrate derivative metabolic process IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR008796 PSAN 2 123
No external refs found!