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  5. Vocar.0004s0424.1

Vocar.0004s0424.1 (32889786)


Aliases : 32889786

Description : Vacuolar protein sorting-associated protein 54, C-terminal [Interproscan].


Gene families : OG_01_0002044 (OrthoFinder) Phylogenetic Tree(s): OG0002044_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0004s0424.1
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Cre02.g087551 30786045 Vesicle trafficking.target membrane tethering.GARP/EARP... 0.02 OrthoFinder
Cz04g31220.t1 No alias Vacuolar protein sorting-associated protein 54,... 0.02 OrthoFinder
Dusal.0077s00018.1 33192461 Vacuolar protein sorting-associated protein 54,... 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0042147 retrograde transport, endosome to Golgi IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004725 protein tyrosine phosphatase activity IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
CC GO:0005892 acetylcholine-gated channel complex IEP Enrichment
BP GO:0006470 protein dephosphorylation IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0034702 ion channel complex IEP Enrichment
CC GO:0043235 receptor complex IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
CC GO:0098802 plasma membrane signaling receptor complex IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR012501 Vps54_C 319 427
No external refs found!