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Aliases : 32889625
Description : RNA recognition motif domain [Interproscan].
Gene families : OG_01_0000048 (OrthoFinder) Phylogenetic Tree(s): OG0000048_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Vocar.0004s0355.1 | |
| Cluster | HCCA: Cluster_139 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00021043.13 | tig00021043_g17622.t1 | No description available | 0.02 | OrthoFinder | |
| Cre01.g024200 | 30788323 | RNA processing.RNA 3-end polyadenylation.Cleavage... | 0.02 | OrthoFinder | |
| Cre13.g586916 | 30783868 | RNA processing.RNA splicing.spliceosome-associated... | 0.04 | OrthoFinder | |
| Cz06g14010.t1 | No alias | RNA recognition motif domain [Interproscan]. | 0.02 | OrthoFinder | |
| Dusal.0116s00021.1 | 33196032 | RNA recognition motif domain [Interproscan]. | 0.04 | OrthoFinder | |
| Dusal.0322s00004.1 | 33197814 | RNA recognition motif domain [Interproscan]. | 0.03 | OrthoFinder | |
| EOD42035 | No alias | RNA recognition motif domain [Interproscan]. | 0.03 | OrthoFinder | |
| Transcript_contig_3626 | 3626 | RNA recognition motif domain [Interproscan]. | 0.02 | OrthoFinder | |
| XM_003057264.1 | MicpuC2_62347, 62347 | RNA recognition motif domain [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|BLLF01003429.1_cds_GFH27307.1_21784 | HaLaN_25610, GFH27307 | RRM domain-containing protein | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0003872 | 6-phosphofructokinase activity | IEP | Enrichment |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Enrichment |
| MF | GO:0003917 | DNA topoisomerase type I (single strand cut, ATP-independent) activity | IEP | Enrichment |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Enrichment |
| MF | GO:0005524 | ATP binding | IEP | Enrichment |
| MF | GO:0005525 | GTP binding | IEP | Enrichment |
| CC | GO:0005839 | proteasome core complex | IEP | Enrichment |
| BP | GO:0006082 | organic acid metabolic process | IEP | Enrichment |
| BP | GO:0006090 | pyruvate metabolic process | IEP | Enrichment |
| BP | GO:0006096 | glycolytic process | IEP | Enrichment |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | Enrichment |
| BP | GO:0006265 | DNA topological change | IEP | Enrichment |
| BP | GO:0006757 | ATP generation from ADP | IEP | Enrichment |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | Enrichment |
| MF | GO:0008443 | phosphofructokinase activity | IEP | Enrichment |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | Enrichment |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | Enrichment |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | Enrichment |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | Enrichment |
| MF | GO:0016407 | acetyltransferase activity | IEP | Enrichment |
| MF | GO:0016410 | N-acyltransferase activity | IEP | Enrichment |
| MF | GO:0016746 | acyltransferase activity | IEP | Enrichment |
| MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | Enrichment |
| MF | GO:0016831 | carboxy-lyase activity | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Enrichment |
| MF | GO:0019200 | carbohydrate kinase activity | IEP | Enrichment |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Enrichment |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Enrichment |
| BP | GO:0046031 | ADP metabolic process | IEP | Enrichment |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | Enrichment |
| BP | GO:0051276 | chromosome organization | IEP | Enrichment |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | Enrichment |
| BP | GO:0071103 | DNA conformation change | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000504 | RRM_dom | 23 | 91 |
| No external refs found! |