1. Home
  2. Species
  3. Volvox carteri
  4. Sequence
  5. Vocar.0004s0289.1

Vocar.0004s0289.1 (32889738)


Aliases : 32889738

Description : Ubiquitinyl hydrolase, variant UBP zinc finger; Peptidase C19, ubiquitin carboxyl-terminal hydrolase; Ubiquitin-associated domain; Zinc finger, UBP-type [Interproscan].


Gene families : OG_01_0002960 (OrthoFinder) Phylogenetic Tree(s): OG0002960_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0004s0289.1
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Cre02.g080350 30786066 Protein degradation.peptidase families.cysteine-type... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
BP GO:0016579 protein deubiquitination IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003689 DNA clamp loader activity IEP Enrichment
MF GO:0005244 voltage-gated ion channel activity IEP Enrichment
MF GO:0005247 voltage-gated chloride channel activity IEP Enrichment
MF GO:0005253 anion channel activity IEP Enrichment
MF GO:0005254 chloride channel activity IEP Enrichment
CC GO:0005663 DNA replication factor C complex IEP Enrichment
CC GO:0005666 RNA polymerase III complex IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006383 transcription by RNA polymerase III IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0006821 chloride transport IEP Enrichment
MF GO:0008308 voltage-gated anion channel activity IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0022832 voltage-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
CC GO:0030880 RNA polymerase complex IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR041432 UBP13_Znf-UBP_var 27 88
IPR001394 Peptidase_C19_UCH 331 973
IPR015940 UBA 761 798
IPR015940 UBA 831 866
IPR001607 Znf_UBP 201 277
No external refs found!