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  5. Vocar.0004s0230.1

Vocar.0004s0230.1 (32889720)


Aliases : 32889720

Description : Proteasome alpha-subunit, N-terminal domain; Proteasome, subunit alpha/beta [Interproscan].


Gene families : OG_01_0003165 (OrthoFinder) Phylogenetic Tree(s): OG0003165_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0004s0230.1
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001160.15 tig00001160_g7349.t1 Protein degradation.26S proteasome.20S core... 0.03 OrthoFinder
Cre17.g705400 30782060, POA1 Protein degradation.26S proteasome.20S core... 0.06 OrthoFinder
EOD10346 No alias Proteasome, subunit alpha/beta; Proteasome... 0.07 OrthoFinder
EOD29147 No alias Proteasome, subunit alpha/beta; Proteasome... 0.07 OrthoFinder
OT_06G00380.1 No alias Proteasome alpha-subunit, N-terminal domain; Proteasome,... 0.05 OrthoFinder
PTI_01G01300.1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.04 OrthoFinder
Sro383_g131270.1 Contig132.g1492 Alpha type-6 0.06 OrthoFinder
TP19G00110.1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.05 OrthoFinder
XM_002500765.1 MICPUN_107861, 107861 Proteasome, subunit alpha/beta; Proteasome... 0.04 OrthoFinder
XM_003059346.1 MicpuC2_49613, 49613 Proteasome, subunit alpha/beta; Proteasome... 0.02 OrthoFinder
lcl|LHPG02000022.1_cds_PRW20644.1_5225 PRW20644 Proteasome subunit alpha type-6 0.03 OrthoFinder
lcl|VRMN01000010.1_cds_KAA8492128.1_5311 KAA8492128 Proteasome subunit alpha type-6 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEA Interproscan
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005534 galactose binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005741 mitochondrial outer membrane IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Enrichment
BP GO:0006479 protein methylation IEP Enrichment
BP GO:0006480 N-terminal protein amino acid methylation IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
BP GO:0008213 protein alkylation IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
CC GO:0030008 TRAPP complex IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
BP GO:0031365 N-terminal protein amino acid modification IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
CC GO:0031968 organelle outer membrane IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR000426 Proteasome_asu_N 8 30
IPR001353 Proteasome_sua/b 35 219
No external refs found!