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  5. Vocar.0004s0142.1

Vocar.0004s0142.1 (32889523)


Aliases : 32889523

Description : Rhodanase, C-terminal; UPF0176, acylphosphatase-like domain; Serine hydrolase FSH [Interproscan].


Gene families : OG_01_0000348 (OrthoFinder) Phylogenetic Tree(s): OG0000348_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0004s0142.1
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
EOD20446 No alias UPF0176, acylphosphatase-like domain; Serine hydrolase... 0.02 OrthoFinder
PTI_13G01060.1 No alias Rhodanase, C-terminal; Rhodanese-like domain [Interproscan]. 0.03 OrthoFinder
Transcript_contig_54247 54247 Rhodanase, C-terminal; Rhodanese-like domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
MF GO:0004620 phospholipase activity IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005669 transcription factor TFIID complex IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR022111 Rhodanese_C 404 481
IPR040503 TRHO_N 27 125
IPR005645 FSH_dom 690 732
IPR005645 FSH_dom 887 1068
No external refs found!