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  5. Vocar.0004s0133.1

Vocar.0004s0133.1 (32889701)


Aliases : 32889701

Description : Ribosomal protein L34Ae [Interproscan].


Gene families : OG_01_0004984 (OrthoFinder) Phylogenetic Tree(s): OG0004984_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0004s0133.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000632.3 tig00000632_g2738.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 OrthoFinder
Cre16.g661050 30777324, RPL34 Protein biosynthesis.cytosolic ribosome.large subunit... 0.29 OrthoFinder
Dusal.0013s00032.1 33200934 Ribosomal protein L34Ae [Interproscan]. 0.1 OrthoFinder
OT_04G04220.1 No alias Ribosomal protein L34Ae [Interproscan]. 0.08 OrthoFinder
PTI_04G00620.1 No alias Ribosomal protein L34Ae [Interproscan]. 0.13 OrthoFinder
Sro327_g118460.1 Contig839.g9254 60S ribosomal protein L34 0.22 OrthoFinder
SymbC1.scaffold193.9 193.9 Ribosomal protein L34Ae [Interproscan]. 0.05 OrthoFinder
TP04G05710.1 No alias Ribosomal protein L34Ae [Interproscan]. 0.19 OrthoFinder
XM_002504768.1 MICPUN_86588, 86588 Ribosomal protein L34Ae [Interproscan]. 0.13 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495412.1_1410 KAA8495412 60S ribosomal protein L34 0.1 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006487 protein N-linked glycosylation IEP Enrichment
BP GO:0007021 tubulin complex assembly IEP Enrichment
BP GO:0007023 post-chaperonin tubulin folding pathway IEP Enrichment
CC GO:0008250 oligosaccharyltransferase complex IEP Enrichment
MF GO:0008417 fucosyltransferase activity IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
MF GO:0048487 beta-tubulin binding IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
InterPro domains Description Start Stop
IPR008195 Ribosomal_L34Ae 1 94
No external refs found!