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  5. Vocar.0004s0119.1

Vocar.0004s0119.1 (32889477)


Aliases : 32889477

Description : ATPase, AAA-type, core [Interproscan].


Gene families : OG_01_0000770 (OrthoFinder) Phylogenetic Tree(s): OG0000770_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0004s0119.1
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Cre04.g229300 30791545, RCA1 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.05 OrthoFinder
Cz13g02230.t1 No alias ATPase, AAA-type, core [Interproscan]. 0.03 OrthoFinder
OT_04G02530.1 No alias ATPase, AAA-type, core [Interproscan]. 0.02 OrthoFinder
XM_002501464.1 MICPUN_58139, 58139 Ribulose bisphosphate carboxylase/oxygenase... 0.03 OrthoFinder
lcl|BLLF01000147.1_cds_GFH08236.1_2713 HaLaN_03167, GFH08236 Rubisco activase 0.02 OrthoFinder
lcl|BLLF01001289.1_cds_GFH18353.1_12830 HaLaN_15147, GFH18353 ATPase_AAA_core domain-containing protein 0.03 OrthoFinder
lcl|BLLF01002295.1_cds_GFH23530.1_18007 HaLaN_21153, GFH23530 Ribulose bisphosphate carboxylase/oxygenaseactivase 0.02 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60797.1_4613 PRW60797 Rubisco activase 0.02 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59108.1_7247 PRW59108 Rubisco activase 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003852 2-isopropylmalate synthase activity IEP Enrichment
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006551 leucine metabolic process IEP Enrichment
BP GO:0009098 leucine biosynthetic process IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016851 magnesium chelatase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Enrichment
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Enrichment
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 186 308
No external refs found!