1. Home
  2. Species
  3. Volvox carteri
  4. Sequence
  5. Vocar.0004s0096.1

Vocar.0004s0096.1 (32889495)


Aliases : 32889495

Description : Gdt1 family [Interproscan].


Gene families : OG_01_0000360 (OrthoFinder) Phylogenetic Tree(s): OG0000360_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0004s0096.1
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021435.42 tig00021435_g21421.t1 GDT1-like protein 5 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder
Cre16.g660050 30777912 GDT1-like protein 2, chloroplastic OS=Oryza sativa... 0.03 OrthoFinder
Transcript_contig_90038 90038 Gdt1 family [Interproscan]. 0.02 OrthoFinder
XM_002506718.1 MICPUN_72771, 72771 Gdt1 family [Interproscan]. 0.02 OrthoFinder
XM_002508995.1 MICPUN_98159, 98159 Gdt1 family [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Enrichment
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
InterPro domains Description Start Stop
IPR001727 Gdt1 253 325
IPR001727 Gdt1 125 204
No external refs found!