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  5. Vocar.0004s0050.1

Vocar.0004s0050.1 (32889583)


Aliases : 32889583

Description : GTP binding domain [Interproscan].


Gene families : OG_01_0000636 (OrthoFinder) Phylogenetic Tree(s): OG0000636_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0004s0050.1
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
Cre03.g172250 30788084 No description available 0.02 OrthoFinder
TP01G08460.1 No alias GTPase Der, C-terminal KH-domain-like; GTP binding... 0.02 OrthoFinder
XM_002509200.1 MICPUN_98167, 98167 GTP binding domain; GTPase Der, C-terminal... 0.03 OrthoFinder
XM_003061465.1 MicpuC2_44721, 44721 GTPase Der, C-terminal KH-domain-like; GTP binding... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006090 pyruvate metabolic process IEP Enrichment
BP GO:0006096 glycolytic process IEP Enrichment
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006757 ATP generation from ADP IEP Enrichment
BP GO:0009132 nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030119 AP-type membrane coat adaptor complex IEP Enrichment
CC GO:0030131 clathrin adaptor complex IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0046031 ADP metabolic process IEP Enrichment
BP GO:0046939 nucleotide phosphorylation IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
InterPro domains Description Start Stop
IPR006073 GTP-bd 325 459
No external refs found!