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  5. Vocar.0004s0029.1

Vocar.0004s0029.1 (32889788)


Aliases : 32889788

Description : VRR-NUC domain [Interproscan].


Gene families : OG_01_0001401 (OrthoFinder) Phylogenetic Tree(s): OG0001401_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0004s0029.1
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Dusal.0050s00007.1 33193853 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016788 hydrolase activity, acting on ester bonds IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004133 glycogen debranching enzyme activity IEP Enrichment
MF GO:0004134 4-alpha-glucanotransferase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
MF GO:0019905 syntaxin binding IEP Enrichment
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Enrichment
MF GO:0035091 phosphatidylinositol binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR014883 VRR_NUC 1528 1631
No external refs found!